神经元分析与可视化库
navis的Python项目详细描述
navis是一个用于神经元分析和 以层次树状神经元数据为中心的可视化。
功能:
- interactive 2D (matplotlib) and 3D (vispy/plotly) plotting of neurons
- virtual neuron surgery: cutting, pruning, rerooting
- clustering methods (e.g. by connectivity or synapse placement)
- R bindings (e.g. for libraries nat, rcatmaid, elmr)
- interfaces with Blender 3D and Cytoscape