无法运行.py文件,但是python中的所有代码都可用

2024-04-29 09:15:38 发布

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from Bio import SeqIO
import re, os
import pandas as pd
from Bio.Seq import Seq
from Bio.Alphabet import generic_dna
from Bio.SeqRecord import SeqRecord
os.chdir('c:\\Users\Workspace\\Desktop')

f_out = os.path.join(os.getcwd(),'convertedgisaid','pandemic2009.txt')
fileNameStruct = "pandemic2009p"
fileCount = 0
fout = open(f_out,'w')
number_of_files = 5

while(fileCount<number_of_files): 
 f_in = os.path.join(os.getcwd(),'convertedgisaid',fileNameStruct+str(fileCount)+".txt")
 f = open(f_in,'r')
 records = f.read()
 records = re.sub("_"," ",records)
 records = records.split('\n')
 records = records[1:]
 for rec in records:
  current = rec.split('|')
  fout.write(current[0]+" "+rec[-1:]+"\n")
 fileCount+=1

fout.close()

无法运行.py文件,但是python中的所有代码都可用!还有一个原因是python不能识别我的标签吗?你知道吗

对不起,我是这里的初学者:(


Tags: pathinfromimportreosseqrecordout