使用Python的csv.writer生成表头行
我有一段Python代码,可以生成一个.csv文件,但我不知道怎么添加列名或者表头。以下是我的代码:
handle = open(sys.argv[1])
with open('protparams.csv', 'w') as fp:
writer = csv.writer(fp, delimiter=',')
for record in SeqIO.parse(handle, "fasta"):
seq = str(record.seq)
X = ProtParam.ProteinAnalysis(seq)
data = [seq,X.get_amino_acids_percent(),X.aromaticity(),X.gravy(),X.isoelectric_point(),X.secondary_structure_fraction(),X.molecular_weight(),X.instability_index()]
writer.writerow(data)
我试着加了一些东西,比如:
writer = csv.writer(fp, delimiter=',',[seq,aa_percentage,aromaticity,gravy,isoelectric_point,secondary_structure_fraction,molecular_weight,instability_index])
但显然这样不行。
有没有人有什么好主意?
1 个回答
2
在循环之前写上头部信息:
handle = open(sys.argv[1])
with open('protparams.csv', 'w') as fp:
writer = csv.writer(fp, delimiter=',')
writer.writerow(['heading1','heading2','heading3'])
for record in SeqIO.parse(handle, "fasta"):
seq = str(record.seq)
X = ProtParam.ProteinAnalysis(seq)
data = [seq,X.get_amino_acids_percent(),X.aromaticity(),X.gravy(),X.isoelectric_point(),X.secondary_structure_fraction(),X.molecular_weight(),X.instability_index()]
writer.writerow(data)